Diagnostic single nucleotide polymorphisms for identifying westslope cutthroat trout (Oncorhynchus clarki lewisi), Yellowstone cutthroat trout (Oncorhynchus clarkii bouvieri) and rainbow trout (Oncorhynchus mykiss).
نویسندگان
چکیده
We describe 12 diagnostic single nucleotide polymorphism (SNP) assays for use in species identification among rainbow and cutthroat trout: five of these loci have alleles unique to rainbow trout (Oncorhynchus mykiss), three unique to westslope cutthroat trout (O. clarkii lewisi) and four unique to Yellowstone cutthroat trout (O. clarkii bouvieri). These diagnostic assays were identified using a total of 489 individuals from 26 populations and five fish hatchery strains.
منابع مشابه
Cold tolerance performance of westslope cutthroat trout (Oncorhynchus clarkii lewisi) and rainbow trout (Oncorhynchus mykiss) and its potential role in influencing interspecific hybridization
Hybridization between rainbow trout (Oncorhynchus mykiss (Walbaum, 1792)) and westslope cutthroat trout (Oncorhynchus clarkii lewisi (Girard, 1856)) occurs commonly when rainbow trout are introduced into the range of westslope cutthroat trout. Typically, hybridization ismost common inwarmer, lower elevation habitats, butmuch less common in colder, higher elevation habitats. We assessed the tole...
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Environmental DNA (eDNA) sampling is a powerful tool for detecting invasive and native aquatic species. Often, species of conservation interest co-occur with other, closely related taxa. Here, we developed qPCR (quantitative PCR) markers which distinguish westslope cutthroat trout (Oncorhynchus clarkii lewsi), Yellowstone cutthroat trout (O. clarkii bouvieri), and rainbow trout (O. mykiss), whi...
متن کاملIntercrosses and the U . S . Endangered Species Act : Should Hybridized Populations be Included as Westslope Cutthroat Trout ?
There are currently no policy guidelines for treating hybrids under the U.S. Endangered Species Act (ESA). We considered the scientific basis for determining whether hybridized populations should be included as part of the westslope cutthroat trout (Oncorhynchus clarki lewisi) unit considered for listing under the ESA. Westslope cutthroat trout are threatened by genomic extinction because of wi...
متن کاملMorphological and swimming stamina differences between Yellowstone cutthroat trout (Oncorhynchus clarkii bouvieri), rainbow trout (Oncorhynchus mykiss), and their hybrids
We hypothesized that body shape differences between Yellowstone cutthroat trout (Oncorhynchus clarkii bouvieri), rainbow trout (Oncorhynchus mykiss), and their hybrids may influence swimming ability and thus play an important role in the invasion of nonnative rainbow trout and hybrid trout into native cutthroat trout populations. We reared Yellowstone cutthroat trout, rainbow trout, and recipro...
متن کاملNext-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout.
The increased numbers of genetic markers produced by genomic techniques have the potential to both identify hybrid individuals and localize chromosomal regions responding to selection and contributing to introgression. We used restriction-site-associated DNA sequencing to identify a dense set of candidate SNP loci with fixed allelic differences between introduced rainbow trout (Oncorhynchus myk...
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ورودعنوان ژورنال:
- Molecular ecology resources
دوره 11 2 شماره
صفحات -
تاریخ انتشار 2011